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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015839684.1_cds_XP_016507365.1_20497
CDS Infomation

[gene=LOC107825048] [db_xref=GeneID:107825048] [protein=hypersensitive-induced response protein 1-like] [protein_id=XP_016507365.1] [location=complement(join(11462..11820,12199..12295,12387..12478,12616..12736,12887..13093))] [gbkey=CDS]
Sequence

ATGCCATCTTCACAGAGTATGGGCAATTTGTTGTGCTGTGTACAAGTTGATCAATCCACG
GTTGCAATTACGGAGCAATTTGGCAAGTATCAAGATGTGCTTCAGCCTGGGTGTCACTGT
CTCCCTTGGTTCCTGGGATTCAAGCTAGCTGGTCATCTCTCCCTCAGGGTGCAGCAATTG
GATGTGCGCTGCGAGACCAAGACAAAGGATAATGTATTTGTCAATGTTGTTGCGTCAATT
CAGTATCGTGCCCTGGCAGATAAAGCAAATGATGCTTTCTACAGACTAAGTAACACTAAG
GGTCAAATTCAGGCCTATGTTTTTGATGTCATAAGAGCGAGTGTTCCTAAACTCAATCTT
GATGACGTCTTTGAGCAAAAAAATGAAATTGCCAAAGCTGTTGAGGATGAACTTGAGAAG
GCTATGTCGGCTTATGGATATGAAATTGTTCAGACACTTATAGTTGATATAGAACCGGAT
GAACGTGTTAAGAGAGCTATGAATGAAATCAATGCTGCTGCTCGGATGAGGGTGGCTGCA
AATGAAAAGGCAGAGGCTGAGAAGATTTTACAAATTAAAAGGGCTGAAGGAGAGGCAGAG
TCAAAGTATCTCTCAGGGTTAGGTATTGCACGACAACGTCAAGCAATTGTGGATGGTTTA
AGAGACAGTGTGCTCGGCTTCTCAGTGAATGTGCCTGGAACCTCAGCAAAGGATGTTATG
GACATGGTCCTTTTAACTCAGTACTTTGACACCATGAAAGAAATTGGCGCTTCCAGCAAA
TCATCTGCCGTTTTCCTACCTCATGGGCCTGGTGCTGTGAGAGATGTGGCAAGCCAGATT
CGCGACGGACTCCTTCAAGCTTCTACTGAGCATTAA

Peptide Sequence

PEP ID

XP_016507365.1
PEP Infomation

PREDICTED: hypersensitive-induced response protein 1-like [Nicotiana tabacum]
Sequence

MPSSQSMGNLLCCVQVDQSTVAITEQFGKYQDVLQPGCHCLPWFLGFKLAGHLSLRVQQL
DVRCETKTKDNVFVNVVASIQYRALADKANDAFYRLSNTKGQIQAYVFDVIRASVPKLNL
DDVFEQKNEIAKAVEDELEKAMSAYGYEIVQTLIVDIEPDERVKRAMNEINAAARMRVAA
NEKAEAEKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFSVNVPGTSAKDVM
DMVLLTQYFDTMKEIGASSKSSAVFLPHGPGAVRDVASQIRDGLLQASTEH

Transcript Sequence

Gene sequence data has not been registered.